Microbiology Spring 1999 Dr. Renée Mullen SYLLABUS (Tentative!)

****announcements (3-4-99) new changes in green

Text: Biology of Microorganisms, 8th Ed., by Madigan, Martinko, and Parker. 1997.

 

 Office hours: Mon. & Wed. 10-11 or by appointment

Office: 406 Science

Phone: 780-4261

e-mail: rmullen@maine.edu

Web page: http://www.usm.maine.edu/~rmullen/

 

Date Topic Reading

1- 12                                             Introduction, history                                    Ch. 1 (all)

1- 14                                             Cell Structure                                               Ch. 3 pp. 58-78, 80-99

1-19                                             Cell structure

1- 21                                             Intro to Microbial diversity                       Ch. 1 pp. 11-14 (also look  over Ch.
                                                                                                                            15   (secs. 15.6-15.9) and glance
                                                                                                                            through Chps.. 16, 17, 18)

Please note that  there is a change here:

I have decided to talk about Metabolism before Growth (since I've already been forced to start talking about metabolism because it is so important in understanding microbial diversity).

Hence the next lectures will be about metabolism.
 

1-28                                            Finish diversity and
                                                    Intro to Metabolism                           Ch. 4 (4.1-4.8)

2-2                                            Metabolism:Fermentation:                  Ch. 4 (4.9-4.10); Ch. 13 (13.19-13.20)
                                                    and Respiration                                  Ch. 4 (4.11-4.15) Ch. 13 (13.14-13.18)

Example of test questions.... Test 1 from last year

2-4                                              Metabolism : Autotrophs                  Ch. 4 (4.16), Ch. 13 (13.1-13.5, 13.7-13.13)
                                                     (Chemolithotrophs and
                                                            phototrophs)                                 
 

2- 9                                             EXAM 1

2-11                                             Growth (we won't talk about much)    Ch. 5 
                                                     Intro to Genetics                                      Ch. 6 (review)  (skip pgs. 188-193 and
                                                                                                                            sec.6.7-6.8)

2-16 & 2-18                                 BREAK

Ok so we're behind!
We will do autotrophs on Tues the 23rd and start in on genetics on the 25.

I will be out of town Monday Feb 22 so will be unable to make office hours. If you need to see me, please call or e-mail and we will set up a time. I will check my e-mail on Sun. Feb 21.
 

2-25  and 3-2                           Genetics and Regulation                             Ch. 6 (review) and Ch. 7
                                                                                                                                    (intro, 7.3,  7.4,)

3-4                                           Introduction to Viruses                               Ch. 8 (8.1-8.2, 8.6-8.8, 8.11 (only T4)-8.12 (just
                                                                                                                        understand difference between lytic and
                                                                                                                        lysogenous),  8.14, 8.16 (influenza only), 8.19,
                                                                                                                        8.22-8.23)

3-9                                             Microbial Genetics                                      Ch. 9 (p. 304-306, 9.5-9.10)
                                                  Genetic Engineering                                   Ch. 10 pg. 357-364, 10.5 10.7, 10.12, 10.13,
                                                                                                                           10.14-10.17)
3- 11                                              EXAM 2
 

3-16                                             Microbial Ecology                                      Ch. 14 (14.1-14.2, skim 14.3-14.9, read
                                                                                                                          14.11-14.15)

3-18                                             Applied (Industrial) Micro                      Ch. 12 (12 12.1-12.2, 12.5-12.14)
                                (Guest Speaker Dr. Elizabeth Ehrenfeld from IDEXX!)

3- 23 & 3-25                               BREAK

Who has my textbook?
So we're switching gears here and for the topics below (if you really agree to this) you will choose the subjects within these topics that you would like to delve deeply into (ie. read  and discuss the primary literature)

If you have thoughts on these topics please e-mail (rmullen@maine.edu) them to me as soon as possible so I can get busy looking for articles.
Access here the ones I have so far

3-30                                             Environmental Micro                               Ch. 12 (12.15), Ch. 14 (14.19-14.20)

4 -1                                    Waste Treament Plant (meet there at the end of eastern end of Marginal way at 11:30)

4-6                                               discussion of future topics and papers

4-8                                               Biological warfare
                                                    The nitrogen cycle

4-13                                            The nitrogen cycle (continued) and sulfur cycle
                                                    Bioremediation and Biodegradation

 

4-15                                             EXAM 3

4-20                                             Immunology                                             Ch. 20 (20.1-20.9 (but don't get bogged down
                                                                                                                        in this)

4-22                                             Antibiotics                                         Paper Antibiotic Resistance and TB paper
                                                    Tuberculosis                                      also text pp. 412 -419, 938-940 (sec. 23.3)

4-27                                             Epidemiology    (including definitions, updated 5-2)             Ch. 22 (22.1-22.5,  22.10)

4-29                                             review and discussion

5-4                                               FINAL EXAM Tues. 8:00-10:00

                                        Please bring the articles I gave you on Thursday.
                            (Giant Sulfur-eating Microbe Found
                            and Dense Populations of a Giant Sulfur Bacterium in
                            Namibian Shelf Sediments)
 

Hey everyone. I've got all your tests graded... looks like no one was hurt by your final exam, which is good, some people even brought up their grades. I will try e-mailing your grades to you, if you don't get anything, please let me know via e-mail (rmullen@maine.edu)..or call. You can come by to pick up your exams, ..if I am not here they will be in the bio office 8-4:30 weekdays.

You were  such a good class, Thank you so much for that.. it was fun and I will miss you. Keep in touch if you can, I will have the same e-mail (and am also working on getting some of our pictures on this page)

 

IMPORTANT! Tests will be based on lecture material. The book is for REFERENCE, i.e. reading assignments are meant to clarify material presented in lecture.

Lecture attendance is not compulsory, but strongly encouraged. You are responsible for lecture material, all material posted on the web, and any announcements concerning changes in schedule, etc. that may be made in lecture.

 

 

GRADES

Exam 1 100

Exam 2 100

Exam 3 100

Final exam 125

Total 425